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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015808541.1_cds_XP_016495379.1_9699
CDS Infomation

[gene=LOC107814469] [db_xref=GeneID:107814469] [protein=phytanoyl-CoA dioxygenase-like isoform X3] [protein_id=XP_016495379.1] [location=join(106147..106204,106296..106420,106504..106564,112276..112394,114407..114554,114641..114785,114904..114990,116112..116154)] [gbkey=CDS]
Sequence

ATGGGTATTGAAGGAGGAAACCTGAGTTCAGAGCAGCTTCAGTTCTTCGACTCTAATGGG
TATTTGGTGTTAGAATCATTTGCAAACCCAGCAGAGATTGAGTCCCTTAGGAAGAGAATG
GAACAGATGCTTGATGAGTTTGATTGCTCTTCCACTGCTTCTATTTTCTCTACCAAGAAC
CAACAACAGACGACTAATGACCACTTTTTTGAAAGTGCAGAGAAGATTTCATTCTTCTGG
GAAGCTCTTCATGAGAAAGATCCTGTATTTAATAAGTTCTCTAGCTCGGACAAAGTCTCA
GGCATGCTGCGGTCATTGGGCTACCAAAGGCCAGTAGTCATTCAGTCAATGTACATATTC
AAGCAACCAGGTATTGGGGGTGAAGTAGTGCCGCACCAGGATAACTCTTTTCTGTACACT
GAACCAACAACGTGCACTGGCTTGTGGCTGGCTTTAGAGGATGCAACAATTGTAAATGGC
TGTCTCTGGGCTATACCGGGATCCCACAGAAATGGCCTTGTGAGGAGATTCCTTAGAGAT
GAAAATGGGGTTCACTTTGATAGGCCATCTCCATGTTATAACCAGAAAGATTTCGTTCCG
CTTGAAGTAAAAGCTGGATCTTTGGTAGTCATTCACGGAGATCTTATTCACCAGAGTTTT
GAGAACCAGTCTTCAAAGTCACGACATGCATACAGTTTGCATGTGGTGGATACTAATGGC
TGCAAATGGGCAGAAGACAATTGGATTAGAAGAAATGTGGATCCAGAGCCCTTATACAGT
TGTTGA

Peptide Sequence

PEP ID

XP_016495379.1
PEP Infomation

PREDICTED: phytanoyl-CoA dioxygenase-like isoform X3 [Nicotiana tabacum]
Sequence

MGIEGGNLSSEQLQFFDSNGYLVLESFANPAEIESLRKRMEQMLDEFDCSSTASIFSTKN
QQQTTNDHFFESAEKISFFWEALHEKDPVFNKFSSSDKVSGMLRSLGYQRPVVIQSMYIF
KQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDATIVNGCLWAIPGSHRNGLVRRFLRD
ENGVHFDRPSPCYNQKDFVPLEVKAGSLVVIHGDLIHQSFENQSSKSRHAYSLHVVDTNG
CKWAEDNWIRRNVDPEPLYSC

Transcript Sequence

Gene sequence data has not been registered.